# STOCKHOLM 1.0
#=GS AGO1_SCHPO/500-799    AC O74957.1
#=GS AGO6_ARATH/541-851    AC O48771.2
#=GS AGO4_ARATH/577-885    AC Q9ZVD5.2
#=GS TAG76_CAEEL/660-966   AC P34681.2
#=GS O16720_CAEEL/566-867  AC O16720.2
#=GS O62275_CAEEL/594-924  AC O62275.1
#=GS YQ53_CAEEL/650-977    AC Q09249.1
#=GS NRDE3_CAEEL/673-1001  AC Q21691.1
#=GS Q17567_CAEEL/397-708  AC Q17567.1
#=GS AUB_DROME/555-852     AC O76922.1
#=GS PIWI_DROME/538-829    AC Q9VKM1.1
#=GS PIWL1_HUMAN/555-847   AC Q96J94.1
#=GS PIWI_ARCFU/110-406    AC O28951.1
#=GS PIWI_ARCFU/110-406    DR PDB; 2W42 B; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 1YTU B; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 2BGG B; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 1W9H A; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 2BGG A; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 1YTU A; 110-406;
#=GS PIWI_ARCFU/110-406    DR PDB; 2W42 A; 110-406;
#=GS Y1321_METJA/426-699   AC Q58717.1
#=GS O67434_AQUAE/419-694  AC O67434.1
#=GS O67434_AQUAE/419-694  DR PDB; 1YVU A; 419-694;
#=GS O67434_AQUAE/419-694  DR PDB; 2F8S A; 419-694;
#=GS O67434_AQUAE/419-694  DR PDB; 2F8T A; 419-694;
#=GS O67434_AQUAE/419-694  DR PDB; 2F8S B; 419-694;
#=GS O67434_AQUAE/419-694  DR PDB; 2NUB A; 419-694;
#=GS O67434_AQUAE/419-694  DR PDB; 2F8T B; 419-694;
#=GS AGO10_ARATH/625-946   AC Q9XGW1.1
AGO1_SCHPO/500-799               YLFFILDK.NSPEP.YGSIKRVCNTMLGVPSQCAISKHILQS.........KPQYCANLGMKINVKVGGIN.CSLIPKSNP....LGNVPTL.........ILGGDVYHPGVGA..........TGVSIASIVASVD.LNGCKYTAVSRSQPRHQEVIEG.MKD............IVVYLLQGFRAMTKQ.QPQRIIYFRDGTSEGQFLSVINDELSQIKEACH.......SLSPKYN..PKILVCTTQKRHHARFFIKNKSDG......................DRNGNPLPGTII...EKHVTHPYQYDFYLISHPSLQGVSVPVHYTVLHDEIQMPPDQF.QTL......CYNLCYVYARAT....SAVSLVPPVYYAHLVSNLARYQDV
AGO6_ARATH/541-851               FILCILPERKTSDI.YGPWKKICLTEEGIHTQCICPIKI............SDQYLTNVLLKINSKLGGIN.SLLGIEYSYNIPLINKIPTL.........ILGMDVSHGPPGR.........ADVPSVAAVVGSKCWPLISRYRAAVRTQSPRLEMIDSLFQPIENTE..KGDNGIMNELFVEFYRTSRARKPKQIIIFRDGVSESQFEQVLKIEVDQIIKAYQ.......RLGESDV..PKFTVIVAQKNHHTKLFQAKGPE...........................NVPAGTVV...DTKIVHPTNYDFYMCAHAGKIGTSRPAHYHVLLDEIGFSPDDL.QNL......IHSLSYVNQRST....TATSIVAPVRYAHLAAAQVAQFTK
AGO4_ARATH/577-885               FILCVLPDKKNSDL.YGPWKKKNLTEFGIVTQCMAPTRQPND...........QYLTNLLLKINAKLGGLN.SMLSVERTPAFTVISKVPTI.........ILGMDVSHGSPGQ.........SDVPSIAAVVSSREWPLISKYRASVRTQPSKAEMIESLVKKNGT.....EDDGIIKELLVDFYTSSNKRKPEHIIIFRDGVSESQFNQVLNIELDQIIEACK.......LLDANWN..PKFLLLVAQKNHHTKFFQPTSPE...........................NVPPGTII...DNKICHPKNNDFYLCAHAGMIGTTRPTHYHVLYDEIGFSADEL.QEL......VHSLSYVYQRST....SAISVVAPICYAHLAAAQLGTFMK
TAG76_CAEEL/660-966              CIIVVLQS.KNSDI.YMTVKEQSDIVHGIMSQCVLMKNVSRP.........TPATCANIVLKLNMKMGGIN..SRIVADKITNKYLVDQPTM.........VVGIDVTHPTQAEM.......RMNMPSVAAIVANVD.LLPQSYGANVKVQKKCRESVVY.LLD............AIRERIITFYRHTKQ.KPARIIVYRDGVSEGQFSEVLREEIQSIRTACL.......AIAEDFR..PPITYIVVQKRHHARIFCKYQNDM.....................VGKAKNVPPGTTV...DTGIVSPEGFDFYLCSHYGVQGTSRPARYHVLLDECKFTADEI.QSI......TYGMCHTYGRCT....RSVSIPTPVYYADLVATRARCHVK
O16720_CAEEL/566-867             LIVVVLPG..KTPI.YAEVKRVGDTVLGIATQCVQAKNAIRT.........TPQTLSNLCLKMNVKLGGVN.SILLPNVRPR...IFNEPVI.........FLGCDITHPAAGD.........TRKPSIAAVVGSMD.AHPSRYAATVRVQQHRQEIITD.LTY............MVRELLVQFYRNTRF.KPARIVVYRDGVSEGQLFNVLQYELRAIREACV.......MLESGYQ..PGITFIAVQKRHHTRLFAADKADQ.....................VGKAFNIPPGTTV...DVGITHPTEFDFFLCSHAGIQGTSRPSHYHVLWDDNDLTADEL.QQL......TYQMCHTYVRCT....RSVSIPAPAYYAHLVAFRARYHLV
O62275_CAEEL/594-924             TFVFIITD.DSITT.LHQRYKMIEKDTKMIVQDMKLSKALSV..IN...AGKRLTLENVINKTNVKLGGSN..YVFVDAKKQL.....DSHL.........IIGVGISAPPAGTKYAM.ENKGVLNPNVIGYAYNA..QHNQEFSGDFVLNSASQDTLAP.IED............IVMHSLNEYQKFHDGGLPRRVIVYRTGTSEGNHGSIMAYEIPLARAAMR.......DFSPDIQ....LVYIVVSKDHSFRFFKPDLASLASRPQATSSTASRHSAMPAAPKAWDLNIAPGILV...DSIVTNPACKQFFLNSHITLQGTAKTPLYTVLADDAKVSMTAL.EDI......TYKLCHLHQIVG....LPTSLPTPLYVANEYAKRGRNLWN
YQ53_CAEEL/650-977               DILVGIAR.EKKPD.VHDILKYFEESIGLQTIQLCQQTVDKMMGG....QGGRQTIDNVMRKFNLKCGGTNFFVEIPNAVRGKAVCSNNETLRKKLLEHVQFIGFEISHGASRTLFDRSRSQMDGEPSVVGVSYSLT...NSTQLGGFTYLQTQKEYKLQKLDE............FFPKCVRSYKEHSKT.LPTRIVIYRVGAGEGNFNRVKE.EVEEMRRTFD.......KIQPGYR..PHLVVIIAQRASHARVFPSCISGN.....................RATDQNIPSGTCV...ENVLTSYGYDEFILSSQTPLIGTVRPCKYTILVNDAKWSKNEL.MHL......TYFRAFGHQVSY....QPPSVPDVLYAAENLAKRGRNNYK
NRDE3_CAEEL/673-1001             TIVFGIIA.EKRPD.MHDILKYFEEKLGQQTIQISSETADKFMRD....HGGKQTIDNVIRKLNPKCGGTNFLIDVPESVGHRVVCNNSAEMRAKLYAKTQFIGFEMSHTGARTRFDIQKVMFDGDPTVVGVAYSL..KHSAQLGGFSYFQESRLHKLTN.LQE............KMQICLNAYEQSSSY.LPETVVVYRVGSGEGDYPQIVN.EVNEMKLAAR.......KKKHGYN..PKFLVICTQRNSHIRVFPEHINERG....................KSMEQNVKSGTCV...DVPGASHGYEEFILCCQTPLIGTVKPTKYTIIVNDCRWSKNEI.MNV......TYHLAFAHQVSY....APPAIPNVSYAAQNLAKRGHNNYK
Q17567_CAEEL/397-708             MLVVMLAD.DNKTR.YDSLKKYLCVECPIPNQCVNLRTLAGKSKDGGENKNLGSIVLKIVLQMICKTGGA...LWKVNIPL.......KSTM.........IVGYDLYHDSTLK...........GKTVGACVSTTS.NDFTQFYSQTRPHENPTQLGNN.LTH............FVRKSLKQYYDNNDKTLPSRLILYRDGAGDGQIPYIKNTEVKLVRDACDAVTDKAAELSNKVQEKIKLAFIIVTKRVNMRILKQGSSS.......................KSAINPQPGTVV...DTTVTRPERMDFYLVPQFVNQGTVTPVSYNIIHDDTGLGPDKH.QQL......AFKLCHLYYNWQ....GTVRVPAPCQYAHKLAFLTAQSLH
AUB_DROME/555-852                IVMVVMRS.PNEEK.YSCIKKRTCVDRPVPSQVVTLKVIAPRQQKP...TGLMSIATKVVIQMNAKLMGA...PWQVVIPL.......HGLM.........TVGFDVCHSPKNK...........NKSYGAFVATMDQKESFRYFSTVNEHIKGQELSEQ.MSV............NMACALRSYQEQHRS.LPERILFFRDGVGDGQLYQVVNSEVNTLKDRLDEI...YKSAGKQEG..CRMTFIIVSKRINSRYFT.............................GHRNPVPGTVV...DDVITLPERYDFFLVSQAVRIGTVSPTSYNVISDNMGLNADKL.QML......SYKMTHMYYNYS....GTIRVPAVCHYAHKLAFLVAESIN
PIWI_DROME/538-829               LILCLVPN.DNAER.YSSIKKRGYVDRAVPTQVVTLKTTKNRSL........MSIATKIAIQLNCKLGYT...PWMIELPL.......SGLM.........TIGFDIAKSTRDR...........KRAYGALIASMDLQQNSTYFSTV.TECSAFDVLANTLWP............MIAKALRQYQHEHRK.LPSRIVFYRDGVSSGSLKQLFEFEVKDIIEKLKTE...YARVQLSP...PQLAYIVVTRSMNTRFFLN.............................GQNPPPGTIV...DDVITLPERYDFYLVSQQVRQGTVSPTSYNVLYSSMGLSPEKM.QKL......TYKMCHLYYNWS....GTTRVPAVCQYAKKLATLVGTNLH
PIWL1_HUMAN/555-847              IVVCLLSS.NRKDK.YDAIKKYLCTDCPTPSQCVVARTLGKQQT.......VMAIATKIALQMNCKMGGE...LWRVDIPL.......KLVM.........IVGIDCYHDMTAG...........RRSIAGFVASIN.EGMTRWFSRCIFQDRGQELVDG.LKV............CLQAALRAW.NSCNEYMPSRIIVYRDGVGDGQLKTLVNYEVPQFLDCLK.......SIGRGYN..PRLTVIVVKKRVNTRFFAQSGGR.........................LQNPLPGTVI...DVEVTRPEWYDFFIVSQAVRSGSVSPTHYNVIYDNSGLKPDHI.QRL......TYKLCHIYYNWP....GVIRVPAPCQYAHKLAFLVGQSIH
PIWI_ARCFU/110-406               GIMLVLPE.YNTPL.YYKLKSYLINS..IPSQFMRYDILSNRNL........TFYVDNLLVQFVSKLGGK...PWILNVDPEK....................GSDIIIGTGAT........RIDNVNLFCFAMVFK.KDGTMLWNEISPIVTSSEYLTY.LKS............TIKKVVYGFKKSNPDWDVEKLTLHVSG....KRPKMKDGETKILKETVE.......ELKKQEMVSRDVKYAILHLNETHPFWVMGDPN........................NRFHPYEGTKVKLSSKRYLLTLLQPYLKRNGLEMVTPIKPLSVEIVSDN..WTSEEYYHNVHEILDEIYYLSKMNWRGF....RSRNLPVTVNYPKLVAGIIANVNR
#=GR PIWI_ARCFU/110-406    SS    EEEEEESS.S-HHH.HHHHHHHHHTT..S-EEEEEHHHHCTSTH........HHHHHHHHHHHHHHTT-B...--EE---TTS....................STSEEEEEEEE........ESSSSEEEEEEEEEE.TTS-EEEEEE--SEEGGGHHHH.HHH............HHHHHHHHHHHTSTT---SEEEEEEES....S--S-HHHHHHHHHHHHH.......HHHHTTSS-TT-EEEEEEEEE---EEEEE-TT........................TT---STSEEEESSSSEEEEEEE-TCEEETTEEEEEEEEEEEEEEEEE-..--TTTHHHHHHHHHHHHHHHTT--TTSS....S--SS-HHHHHHHHHHHHHHHHHH
Y1321_METJA/426-699              CFALIIGKEKYKDNDYYEILKKQLFDLKIISQNILWENWRKDDK........GYMTNNLLIQIMGKLGIK...YFILDSKTPYDY................IMGLDTGLGIFGN............HRVGGCTVVYDSEGKIRRIQPIETPAPGERLHLP................YVIEYLEN..KANIDMENKNILFLRDG.......FIQNSERNDLKEISK.......ELN......SNIEVISIRKNNKYKVFTSDYRI........................GSVFGNDGIFLPHKTPFGSNPVKLSTWLRFNCGNEEGLK...IN..........ESI.MQL......LYDLTKMNYSALYGEGRYLRIPAPIHYADKFVKALGKNWK
O67434_AQUAE/419-694             LVIVFLEEYPKVDP.YKSFLLYDFVKRELLKKMIPSQVILNRTLKN...ENLKFVLLNVAEQVLAKTGNIP..YKLKEIEGKVDA................FVGIDISRITRDG..........KTVNAVAFTKIFNSKGELVRYYLTSYPAFGEKLTEK................AIGDVFSLLEKLGF.KKGSKIVVHRDG.......RLYRDEVAAFK...........KYGELYG..YSLELLEIIKRNNPRFFSNEKFI..............................KGYFYKLSEDSVILATYNQVY.......EGTHQPIKVRKVYGE..LPVEVL.CSQ......ILSLTLMNYSSF....QPIKLPATVHYSDKITKLMLRGIE
#=GR O67434_AQUAE/419-694  SS    EEEEEE---S---S.SS--HHHHHHHHHHHHTT--EEEEEHHHHHH...S-HHHHHHHHHHHHHHHTT-BS..-EES--SS--SE................EEEEEEEEEECSS..........CEEEEEEEEEEEETTS-EEEEEEEEETSSSTCHHHH................HHHHHHHHHHHTT-.-TT-EEEEEESS.......---HHHHHHHH...........HHHHHTT..-EEEEEEEE-SS---EEES-S--..............................TTEEEEETTTEEEE--S---S.......SS-B--EEEEEEE-S..S-HHHH.HHH......HHHHGGGG--TT....S--SS-TTTTTHHHHHHHHHTSSS
AGO10_ARATH/625-946              LLLAILPD.NNGSL.YGDLKRICETELGLISQCCLTKHVFKI.........SKQYLANVSLKINVKMGGRN.TVLVDAISCRIPLVSDIPTI.........IFGADVTHPENGE.........ESSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWQDPVRGTVSGGMIRDLLISFRKATGQ.KPLRIIFYRDGVSEGQFYQVLLYELDAIRKACA.......SLEPNYQ..PPVTFIVVQKRHHTRLFANNHRDKN...................STDRSGNILPGTVV...DTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGI.QSL......TNNLCYTYARCT....RSVSIVPPAYYAHLAAFRARFYLE
#=GC SS_cons                     EEEEEESS-S-HHC.CCHHHHHHHCCHHCHCCCEECCCCCCCCHHH...S-HHHHHHHHHHHHHHHTT-BS..-EEC--STTSSE................EECCCEEEEECCC........ESCCCEEEEEEEEEETTTSEEEEEEEEETCCCCCHHHH.HHH............HHHHHHHHHHHTTTT-TTSEEEEEECS....S..S-HHHHHHHHHHHHH.......HHHHCTTS.TCEEEEEEEECC---EEECESTT........................TT...STTEEEECTTTEEEEEEC-TCCEETTEEECCEEEEEEEEEEEES..S-CCCHHHHHHHHHHHHHHHCCGGTTTT....S--SS-CCCCCHHHHHHHHHCCCC
#=GC seq_cons                    hllslLsc.pspsh.YtslKKhtpschsl.oQslthcslhpp.........hhphlsNlhlphNsKhGGts..hhhlshsht.......shh.........hlGhDlsHsssup..........tssoluuhluohs.ttsspahusspspspppEhlps.lp.............hltchLpsa.cpspp.hPpRIllaRDGsu-Gph.plhp.Elspl+cshc.......plstshp..PplshIllpKpppsRhFspstsp.........................t.Ns.PGThV...DstlspPpphDFaLsupsshpGTs+Ps+YpVlhD-hthos-cl.QpL......sYpLsahahpss....pslslPsPsaYA+hlAthstpph+
//